Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.9□□□□□ -0.82
Nup35Q8R4R6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup35Q8R4R6 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nup35Q8R4R6 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.9□□□□□ -0.83
Nup35Q8R4R6 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Nup35Q8R4R6 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.9□□□□□ -0.83
Nup35Q8R4R6 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.9□□□□□ -0.83
Nup35Q8R4R6 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Nup35Q8R4R6 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Nup35Q8R4R6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nup35Q8R4R6 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.9□□□□□ -0.83
Nup35Q8R4R6 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nup35Q8R4R6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nup35Q8R4R6 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nup35Q8R4R6 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm24830-201ENSMUST00000102024 166 ntBASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm12314-201ENSMUST00000118104 538 ntBASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm26232-201ENSMUST00000083360 166 ntBASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms