Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.48□□□□□ -0.57
Clrn1Q8K445 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Gm3096-201ENSMUST00000185770 364 ntBASIC11.48□□□□□ -0.57
Clrn1Q8K445 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.48□□□□□ -0.57
Clrn1Q8K445 Gm38341-201ENSMUST00000195357 515 ntBASIC11.48□□□□□ -0.57
Clrn1Q8K445 Gm3961-201ENSMUST00000204425 994 ntBASIC11.48□□□□□ -0.57
Clrn1Q8K445 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Gm8712-201ENSMUST00000221090 701 ntBASIC11.48□□□□□ -0.57
Clrn1Q8K445 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Gm23912-201ENSMUST00000104687 87 ntBASIC11.47□□□□□ -0.57
Clrn1Q8K445 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.47□□□□□ -0.57
Clrn1Q8K445 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Gm27046-201ENSMUST00000182160 463 ntBASIC11.47□□□□□ -0.57
Clrn1Q8K445 Gm27390-201ENSMUST00000184516 176 ntBASIC11.47□□□□□ -0.57
Clrn1Q8K445 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.47□□□□□ -0.57
Clrn1Q8K445 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.47□□□□□ -0.57
Clrn1Q8K445 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn1Q8K445 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms