Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 AA914427-201ENSMUST00000193194 1166 ntBASIC12.46□□□□□ -0.41
CopaQ8CIE6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.46□□□□□ -0.41
CopaQ8CIE6 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Gm45186-201ENSMUST00000206874 478 ntBASIC12.46□□□□□ -0.41
CopaQ8CIE6 Gm44967-201ENSMUST00000207047 631 ntBASIC12.46□□□□□ -0.41
CopaQ8CIE6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.46□□□□□ -0.41
CopaQ8CIE6 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.46□□□□□ -0.41
CopaQ8CIE6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopaQ8CIE6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CopaQ8CIE6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CopaQ8CIE6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CopaQ8CIE6 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CopaQ8CIE6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CopaQ8CIE6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CopaQ8CIE6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CopaQ8CIE6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Gm15547-201ENSMUST00000122152 333 ntBASIC12.45□□□□□ -0.42
CopaQ8CIE6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.45□□□□□ -0.42
CopaQ8CIE6 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.45□□□□□ -0.42
CopaQ8CIE6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.45□□□□□ -0.42
CopaQ8CIE6 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Gm26035-201ENSMUST00000083065 308 ntBASIC12.45□□□□□ -0.42
CopaQ8CIE6 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.45□□□□□ -0.42
CopaQ8CIE6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.45□□□□□ -0.42
CopaQ8CIE6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CopaQ8CIE6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms