Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup88Q8CEC0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nup88Q8CEC0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup88Q8CEC0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.38□□□□□ -0.11
Nup88Q8CEC0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nup88Q8CEC0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup88Q8CEC0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup88Q8CEC0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.37□□□□□ -0.11
Nup88Q8CEC0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup88Q8CEC0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Gm15276-201ENSMUST00000145953 498 ntBASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Gm8885-201ENSMUST00000189382 598 ntBASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.36□□□□□ -0.11
Nup88Q8CEC0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms