Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc17Q8CE13 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Gm12208-201ENSMUST00000122004 163 ntBASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Gm9230-201ENSMUST00000188228 532 ntBASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Gm42937-201ENSMUST00000197360 752 ntBASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc17Q8CE13 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Gm14644-201ENSMUST00000116671 647 ntBASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Gm11628-201ENSMUST00000117568 171 ntBASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Gm1821-202ENSMUST00000227415 750 ntBASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc17Q8CE13 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms