Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Gm11964-201ENSMUST00000120982 444 ntBASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Gm12363-201ENSMUST00000122250 668 ntBASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc87Q8CDL9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Gm16379-201ENSMUST00000161469 348 ntBASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Gm8762-201ENSMUST00000193486 339 ntBASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc87Q8CDL9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms