Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Ska3Q8C263 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ska3Q8C263 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Gm13350-201ENSMUST00000120519 479 ntBASIC11.48□□□□□ -0.57
Ska3Q8C263 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.48□□□□□ -0.57
Ska3Q8C263 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Ska3Q8C263 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.48□□□□□ -0.57
Ska3Q8C263 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.48□□□□□ -0.57
Ska3Q8C263 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Gm27046-201ENSMUST00000182160 463 ntBASIC11.48□□□□□ -0.57
Ska3Q8C263 Gm27320-201ENSMUST00000184892 109 ntBASIC11.48□□□□□ -0.57
Ska3Q8C263 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Gm9996-201ENSMUST00000070359 913 ntBASIC11.48□□□□□ -0.57
Ska3Q8C263 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.48□□□□□ -0.57
Ska3Q8C263 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ska3Q8C263 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.48□□□□□ -0.57
Ska3Q8C263 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ska3Q8C263 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.48□□□□□ -0.57
Ska3Q8C263 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.48□□□□□ -0.57
Ska3Q8C263 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ska3Q8C263 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ska3Q8C263 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ska3Q8C263 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Ska3Q8C263 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska3Q8C263 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.47□□□□□ -0.57
Ska3Q8C263 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.47□□□□□ -0.57
Ska3Q8C263 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.47□□□□□ -0.57
Ska3Q8C263 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 Gm24830-201ENSMUST00000102024 166 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 Gm22323-201ENSMUST00000103832 109 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 Gm12015-201ENSMUST00000117065 843 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 Gm14109-201ENSMUST00000118814 309 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 Gm7584-201ENSMUST00000175829 940 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 Gm37259-201ENSMUST00000193903 849 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.47□□□□□ -0.57
Ska3Q8C263 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.47□□□□□ -0.57
Ska3Q8C263 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Gm26232-201ENSMUST00000083360 166 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.47□□□□□ -0.57
Ska3Q8C263 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ska3Q8C263 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ska3Q8C263 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ska3Q8C263 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska3Q8C263 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ska3Q8C263 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska3Q8C263 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ska3Q8C263 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ska3Q8C263 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ska3Q8C263 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms