Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC16.05■□□□□ 0.16
Cps1Q8C196 Gm15528-201ENSMUST00000117821 864 ntBASIC16.05■□□□□ 0.16
Cps1Q8C196 Gm11502-201ENSMUST00000120917 1211 ntBASIC16.05■□□□□ 0.16
Cps1Q8C196 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC16.05■□□□□ 0.16
Cps1Q8C196 Gm23694-201ENSMUST00000179335 110 ntBASIC16.05■□□□□ 0.16
Cps1Q8C196 Mir6923-201ENSMUST00000184592 72 ntBASIC16.05■□□□□ 0.16
Cps1Q8C196 Gm43163-201ENSMUST00000196571 442 ntBASIC16.05■□□□□ 0.16
Cps1Q8C196 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cps1Q8C196 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC16.05■□□□□ 0.16
Cps1Q8C196 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cps1Q8C196 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC16.05■□□□□ 0.16
Cps1Q8C196 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Gm18798-201ENSMUST00000187264 1700 ntBASIC16.05■□□□□ 0.16
Cps1Q8C196 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cps1Q8C196 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cps1Q8C196 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.04■□□□□ 0.16
Cps1Q8C196 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Gm24791-201ENSMUST00000104284 131 ntBASIC16.04■□□□□ 0.16
Cps1Q8C196 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Gm22379-201ENSMUST00000157480 131 ntBASIC16.04■□□□□ 0.16
Cps1Q8C196 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 AC134248.1-201ENSMUST00000216113 1176 ntBASIC16.04■□□□□ 0.16
Cps1Q8C196 Gm40879-201ENSMUST00000220759 612 ntBASIC16.04■□□□□ 0.16
Cps1Q8C196 AC153152.3-201ENSMUST00000222188 1135 ntBASIC16.04■□□□□ 0.16
Cps1Q8C196 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cps1Q8C196 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cps1Q8C196 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Cps1Q8C196 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC16.04■□□□□ 0.16
Cps1Q8C196 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC16.04■□□□□ 0.16
Cps1Q8C196 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cps1Q8C196 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cps1Q8C196 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Gm12194-201ENSMUST00000117756 1012 ntBASIC16.04■□□□□ 0.16
Cps1Q8C196 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC16.04■□□□□ 0.16
Cps1Q8C196 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC16.04■□□□□ 0.16
Cps1Q8C196 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC16.04■□□□□ 0.16
Cps1Q8C196 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cps1Q8C196 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Gm8146-201ENSMUST00000192106 1847 ntBASIC16.03■□□□□ 0.16
Cps1Q8C196 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.03■□□□□ 0.16
Cps1Q8C196 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC16.03■□□□□ 0.16
Cps1Q8C196 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Gm14132-201ENSMUST00000117188 1719 ntBASIC16.03■□□□□ 0.16
Cps1Q8C196 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cps1Q8C196 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.03■□□□□ 0.16
Cps1Q8C196 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cps1Q8C196 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cps1Q8C196 Gm10728-201ENSMUST00000194292 1829 ntBASIC16.03■□□□□ 0.16
Cps1Q8C196 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Gm11560-201ENSMUST00000117567 948 ntBASIC16.03■□□□□ 0.16
Cps1Q8C196 Gm12663-201ENSMUST00000118481 958 ntBASIC16.03■□□□□ 0.16
Cps1Q8C196 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Gm37638-201ENSMUST00000194337 1123 ntBASIC16.03■□□□□ 0.16
Cps1Q8C196 Gm43671-201ENSMUST00000200422 433 ntBASIC16.03■□□□□ 0.16
Cps1Q8C196 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cps1Q8C196 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms