Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.43
Sh3rf2Q8BZT2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sh3rf2Q8BZT2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm23251-201ENSMUST00000103773 110 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm12165-201ENSMUST00000117047 342 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm11941-201ENSMUST00000119904 610 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm14247-201ENSMUST00000120950 237 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm9211-201ENSMUST00000182882 975 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm4034-201ENSMUST00000187674 480 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm37246-201ENSMUST00000192665 835 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm4482-201ENSMUST00000200876 742 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm8956-201ENSMUST00000203939 825 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm1821-202ENSMUST00000227415 750 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Ntng1-201ENSMUST00000051253 327 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh3rf2Q8BZT2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gm7851-201ENSMUST00000117574 323 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gm12857-201ENSMUST00000117678 592 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gm13045-201ENSMUST00000119019 712 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gm15432-201ENSMUST00000121106 195 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gm27530-201ENSMUST00000184096 98 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gm5733-201ENSMUST00000190232 939 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.32□□□□□ -0.44
Sh3rf2Q8BZT2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms