Protein–RNA interactions for Protein: Q8BV16

Zfp398, Zinc finger protein 398, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp398Q8BV16 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Zfp398Q8BV16 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.21□□□□□ -0.45
Zfp398Q8BV16 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp398Q8BV16 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Zfp398Q8BV16 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp398Q8BV16 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp398Q8BV16 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp398Q8BV16 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp398Q8BV16 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp398Q8BV16 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.21□□□□□ -0.46
Zfp398Q8BV16 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp398Q8BV16 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp398Q8BV16 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Zfp398Q8BV16 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Gm13226-201ENSMUST00000117838 404 ntBASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Gm13875-201ENSMUST00000120162 282 ntBASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Gm37008-201ENSMUST00000195712 319 ntBASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Zfp398Q8BV16 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Gm23912-201ENSMUST00000104687 87 ntBASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.19□□□□□ -0.46
Zfp398Q8BV16 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.19□□□□□ -0.46
Zfp398Q8BV16 Gm13316-201ENSMUST00000140537 691 ntBASIC12.19□□□□□ -0.46
Zfp398Q8BV16 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms