Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Gm37042-201ENSMUST00000193816 581 ntBASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Gm43550-201ENSMUST00000200597 303 ntBASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Gm5626-201ENSMUST00000222151 1058 ntBASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm11Q8BUV6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Lsm11Q8BUV6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm11Q8BUV6 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm11Q8BUV6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm11Q8BUV6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm11Q8BUV6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm11Q8BUV6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm11Q8BUV6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm11Q8BUV6 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm11Q8BUV6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm11Q8BUV6 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Gm16044-201ENSMUST00000118475 450 ntBASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 AC152169.2-201ENSMUST00000224558 613 ntBASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm11Q8BUV6 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm11Q8BUV6 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Lsm11Q8BUV6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm11Q8BUV6 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Lsm11Q8BUV6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm11Q8BUV6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Lsm11Q8BUV6 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.51□□□□□ -0.73
Lsm11Q8BUV6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm11Q8BUV6 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms