Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.45□□□□□ -0.42
Nup54Q8BTS4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Gm23949-201ENSMUST00000104027 127 ntBASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Gm27341-201ENSMUST00000183570 106 ntBASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Gm18893-201ENSMUST00000198416 943 ntBASIC12.44□□□□□ -0.42
Nup54Q8BTS4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.44□□□□□ -0.42
Nup54Q8BTS4 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Cog3-203ENSMUST00000227473 4197 ntBASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup54Q8BTS4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Gm14028-201ENSMUST00000117434 479 ntBASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Gm14277-201ENSMUST00000121195 360 ntBASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms