Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Gm24255-201ENSMUST00000104481 128 ntBASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Gm25214-201ENSMUST00000104573 129 ntBASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Gm11531-201ENSMUST00000117614 555 ntBASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Gm2546-201ENSMUST00000182630 991 ntBASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Gm44364-201ENSMUST00000198368 141 ntBASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Gm5950-201ENSMUST00000213337 772 ntBASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Gm13736-201ENSMUST00000119272 253 ntBASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Gm44405-201ENSMUST00000198952 126 ntBASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Paupar-201ENSMUST00000194826 3482 ntBASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.8□□□□□ -0.52
Cpsf4Q8BQZ5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms