Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Mir6420-201ENSMUST00000185032 102 ntBASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm38158-201ENSMUST00000194617 339 ntBASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm44364-201ENSMUST00000198368 141 ntBASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm43822-201ENSMUST00000200285 476 ntBASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm45930-201ENSMUST00000221330 292 ntBASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm24526-201ENSMUST00000082921 158 ntBASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Pcdh20Q8BIZ0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh20Q8BIZ0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm14723-201ENSMUST00000118686 215 ntBASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm4986-201ENSMUST00000119731 549 ntBASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm13342-201ENSMUST00000121055 207 ntBASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm27516-201ENSMUST00000184237 98 ntBASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm10608-202ENSMUST00000213924 676 ntBASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm8227-201ENSMUST00000223306 571 ntBASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh20Q8BIZ0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh20Q8BIZ0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh20Q8BIZ0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh20Q8BIZ0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh20Q8BIZ0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh20Q8BIZ0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh20Q8BIZ0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh20Q8BIZ0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms