Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Gm16296-201ENSMUST00000159905 325 ntBASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Gm6621-201ENSMUST00000193251 772 ntBASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.28□□□□□ -0.12
Samm50Q8BGH2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Samm50Q8BGH2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.27□□□□□ -0.12
Samm50Q8BGH2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Samm50Q8BGH2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Samm50Q8BGH2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Samm50Q8BGH2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Samm50Q8BGH2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Samm50Q8BGH2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.27□□□□□ -0.12
Samm50Q8BGH2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Gm15703-201ENSMUST00000120250 880 ntBASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Gm45865-201ENSMUST00000211815 945 ntBASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Gm43984-201ENSMUST00000204572 2864 ntBASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Samm50Q8BGH2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Gm24231-201ENSMUST00000104315 133 ntBASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Gm38341-201ENSMUST00000195357 515 ntBASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Gm42599-201ENSMUST00000201308 469 ntBASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Gm45925-201ENSMUST00000218882 744 ntBASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms