Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Gm14585-201ENSMUST00000120713 634 ntBASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Gm11956-201ENSMUST00000119525 512 ntBASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.43□□□□□ -0.26
Usp6nlQ80XC3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Gm13263-201ENSMUST00000121271 838 ntBASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Gm45575-201ENSMUST00000210283 548 ntBASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms