Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.24□□□□□ -0.45
Usp8Q80U87 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Usp8Q80U87 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.24□□□□□ -0.45
Usp8Q80U87 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Usp8Q80U87 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Usp8Q80U87 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Usp8Q80U87 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Usp8Q80U87 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Usp8Q80U87 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp8Q80U87 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Usp8Q80U87 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.23□□□□□ -0.45
Usp8Q80U87 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.23□□□□□ -0.45
Usp8Q80U87 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.23□□□□□ -0.45
Usp8Q80U87 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.23□□□□□ -0.45
Usp8Q80U87 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.23□□□□□ -0.45
Usp8Q80U87 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.23□□□□□ -0.45
Usp8Q80U87 Gm11591-201ENSMUST00000120063 702 ntBASIC12.23□□□□□ -0.45
Usp8Q80U87 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Gm8018-201ENSMUST00000173536 789 ntBASIC12.23□□□□□ -0.45
Usp8Q80U87 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Usp8Q80U87 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp8Q80U87 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.22□□□□□ -0.45
Usp8Q80U87 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp8Q80U87 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.22□□□□□ -0.45
Usp8Q80U87 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.22□□□□□ -0.45
Usp8Q80U87 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp8Q80U87 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.22□□□□□ -0.45
Usp8Q80U87 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.22□□□□□ -0.45
Usp8Q80U87 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Usp8Q80U87 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.22□□□□□ -0.45
Usp8Q80U87 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.22□□□□□ -0.45
Usp8Q80U87 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Usp8Q80U87 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.22□□□□□ -0.45
Usp8Q80U87 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Gm6222-202ENSMUST00000182143 629 ntBASIC12.22□□□□□ -0.45
Usp8Q80U87 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Usp8Q80U87 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.22□□□□□ -0.45
Usp8Q80U87 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Usp8Q80U87 Gm6266-201ENSMUST00000203844 806 ntBASIC12.22□□□□□ -0.45
Usp8Q80U87 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp8Q80U87 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp8Q80U87 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms