Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Ush1gQ80T11 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ush1gQ80T11 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ush1gQ80T11 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.34□□□□□ -0.27
Ush1gQ80T11 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.34□□□□□ -0.27
Ush1gQ80T11 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ush1gQ80T11 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ush1gQ80T11 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ush1gQ80T11 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ush1gQ80T11 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ush1gQ80T11 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ush1gQ80T11 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ush1gQ80T11 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ush1gQ80T11 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.33□□□□□ -0.28
Ush1gQ80T11 Gm43058-201ENSMUST00000197645 625 ntBASIC13.33□□□□□ -0.28
Ush1gQ80T11 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Gm17827-201ENSMUST00000211825 742 ntBASIC13.33□□□□□ -0.28
Ush1gQ80T11 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.33□□□□□ -0.28
Ush1gQ80T11 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.33□□□□□ -0.28
Ush1gQ80T11 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ush1gQ80T11 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Gm11989-201ENSMUST00000117240 672 ntBASIC13.32□□□□□ -0.28
Ush1gQ80T11 Gm15515-201ENSMUST00000117827 822 ntBASIC13.32□□□□□ -0.28
Ush1gQ80T11 Gm11362-201ENSMUST00000118838 850 ntBASIC13.32□□□□□ -0.28
Ush1gQ80T11 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Gm43962-201ENSMUST00000203898 190 ntBASIC13.32□□□□□ -0.28
Ush1gQ80T11 Gm43916-201ENSMUST00000205062 967 ntBASIC13.32□□□□□ -0.28
Ush1gQ80T11 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.32□□□□□ -0.28
Ush1gQ80T11 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.32□□□□□ -0.28
Ush1gQ80T11 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush1gQ80T11 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.31□□□□□ -0.28
Ush1gQ80T11 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Gm13888-201ENSMUST00000119148 422 ntBASIC13.31□□□□□ -0.28
Ush1gQ80T11 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.31□□□□□ -0.28
Ush1gQ80T11 Gm10051-201ENSMUST00000145209 414 ntBASIC13.31□□□□□ -0.28
Ush1gQ80T11 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ush1gQ80T11 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms