Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Prpf38bQ80SY5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.83□□□□□ -0.35
Prpf38bQ80SY5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.83□□□□□ -0.35
Prpf38bQ80SY5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm28324-201ENSMUST00000187913 264 ntBASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm4607-201ENSMUST00000206649 577 ntBASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Prpf38bQ80SY5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gm11450-201ENSMUST00000121144 333 ntBASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gm7003-201ENSMUST00000195089 312 ntBASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms