Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Gm5100-201ENSMUST00000195631 589 ntBASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Gm45594-201ENSMUST00000211717 241 ntBASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx55Q6ZPL9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Grk6-205ENSMUST00000224653 2976 ntBASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm12419-201ENSMUST00000116649 636 ntBASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm15610-201ENSMUST00000120584 195 ntBASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm43852-201ENSMUST00000202098 917 ntBASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm45120-201ENSMUST00000208880 408 ntBASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm3619-201ENSMUST00000219947 775 ntBASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms