Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Gm14942-201ENSMUST00000119642 336 ntBASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Gm17877-201ENSMUST00000192578 814 ntBASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Gm14585-201ENSMUST00000120713 634 ntBASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Gm42599-201ENSMUST00000201308 469 ntBASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.1□□□□□ -0.15
Nup98Q6PFD9 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup98Q6PFD9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup98Q6PFD9 Gm12795-201ENSMUST00000117594 539 ntBASIC14.08□□□□□ -0.15
Nup98Q6PFD9 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.08□□□□□ -0.15
Nup98Q6PFD9 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.08□□□□□ -0.15
Nup98Q6PFD9 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.08□□□□□ -0.15
Nup98Q6PFD9 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nup98Q6PFD9 Gm38314-201ENSMUST00000195709 625 ntBASIC14.08□□□□□ -0.15
Nup98Q6PFD9 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.08□□□□□ -0.15
Nup98Q6PFD9 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.08□□□□□ -0.15
Nup98Q6PFD9 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms