Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Gm5455-201ENSMUST00000058710 715 ntBASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc85bQ6PDY0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm12783-201ENSMUST00000121425 397 ntBASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm45594-201ENSMUST00000211717 241 ntBASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc85bQ6PDY0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Ccdc85bQ6PDY0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc85bQ6PDY0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms