Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sdc3Q64519 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.75□□□□□ -0.53
Sdc3Q64519 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.75□□□□□ -0.53
Sdc3Q64519 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sdc3Q64519 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Gm8885-201ENSMUST00000189382 598 ntBASIC11.75□□□□□ -0.53
Sdc3Q64519 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.75□□□□□ -0.53
Sdc3Q64519 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.75□□□□□ -0.53
Sdc3Q64519 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sdc3Q64519 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sdc3Q64519 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sdc3Q64519 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.75□□□□□ -0.53
Sdc3Q64519 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sdc3Q64519 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.74□□□□□ -0.53
Sdc3Q64519 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.74□□□□□ -0.53
Sdc3Q64519 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.74□□□□□ -0.53
Sdc3Q64519 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Gm44651-201ENSMUST00000207343 372 ntBASIC11.74□□□□□ -0.53
Sdc3Q64519 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sdc3Q64519 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.74□□□□□ -0.53
Sdc3Q64519 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc3Q64519 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sdc3Q64519 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Sdc3Q64519 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc3Q64519 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.73□□□□□ -0.53
Sdc3Q64519 Gm14130-201ENSMUST00000118417 987 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms