Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim28Q62318 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim28Q62318 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Trim28Q62318 Gm6114-201ENSMUST00000182472 968 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Gm28937-201ENSMUST00000185413 695 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Gm29400-201ENSMUST00000187208 695 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Gm28662-201ENSMUST00000188446 695 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Gm28251-201ENSMUST00000188835 695 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Gm37318-201ENSMUST00000194325 695 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Gm38017-201ENSMUST00000194768 695 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Gm37287-201ENSMUST00000195449 695 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Gm37793-201ENSMUST00000195548 695 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Gm44126-201ENSMUST00000204831 514 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim28Q62318 Gm7940-201ENSMUST00000218195 769 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim28Q62318 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim28Q62318 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim28Q62318 Gm10179-201ENSMUST00000086233 688 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim28Q62318 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim28Q62318 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim28Q62318 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim28Q62318 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim28Q62318 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim28Q62318 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim28Q62318 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim28Q62318 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim28Q62318 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim28Q62318 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim28Q62318 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim28Q62318 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim28Q62318 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim28Q62318 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.69■□□□□ 0.1
Trim28Q62318 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim28Q62318 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.68■□□□□ 0.1
Trim28Q62318 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.68■□□□□ 0.1
Trim28Q62318 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim28Q62318 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim28Q62318 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.68■□□□□ 0.1
Trim28Q62318 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC15.68■□□□□ 0.1
Trim28Q62318 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim28Q62318 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim28Q62318 Gm29499-201ENSMUST00000189151 486 ntBASIC15.68■□□□□ 0.1
Trim28Q62318 Gm28329-201ENSMUST00000191208 689 ntBASIC15.68■□□□□ 0.1
Trim28Q62318 Gm29171-201ENSMUST00000191397 486 ntBASIC15.68■□□□□ 0.1
Trim28Q62318 Gm38151-201ENSMUST00000195085 289 ntBASIC15.68■□□□□ 0.1
Trim28Q62318 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim28Q62318 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim28Q62318 AC134869.4-202ENSMUST00000224350 837 ntBASIC15.68■□□□□ 0.1
Trim28Q62318 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim28Q62318 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.68■□□□□ 0.1
Trim28Q62318 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.68■□□□□ 0.1
Trim28Q62318 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim28Q62318 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim28Q62318 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim28Q62318 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim28Q62318 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim28Q62318 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim28Q62318 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim28Q62318 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim28Q62318 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim28Q62318 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim28Q62318 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim28Q62318 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim28Q62318 Gm13347-201ENSMUST00000120298 1353 ntBASIC15.67■□□□□ 0.1
Trim28Q62318 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.67■□□□□ 0.1
Trim28Q62318 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim28Q62318 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim28Q62318 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim28Q62318 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.67■□□□□ 0.1
Trim28Q62318 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trim28Q62318 Gm8459-201ENSMUST00000162504 760 ntBASIC15.67■□□□□ 0.1
Trim28Q62318 Gm3508-201ENSMUST00000186012 792 ntBASIC15.67■□□□□ 0.1
Trim28Q62318 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim28Q62318 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.67■□□□□ 0.1
Trim28Q62318 Gm44551-201ENSMUST00000208804 171 ntBASIC15.67■□□□□ 0.1
Trim28Q62318 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim28Q62318 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms