Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn9aQ62205 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm14395-201ENSMUST00000120494 563 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm28833-201ENSMUST00000189671 559 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm43380-201ENSMUST00000200421 220 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn9aQ62205 Olfr692-202ENSMUST00000217827 1126 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scn9aQ62205 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn9aQ62205 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn9aQ62205 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn9aQ62205 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm22594-201ENSMUST00000104251 130 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm11560-201ENSMUST00000117567 948 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.05□□□□□ -0.16
Scn9aQ62205 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm7940-201ENSMUST00000218195 769 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 CT009527.1-201ENSMUST00000224205 339 ntBASIC14.05□□□□□ -0.16
Scn9aQ62205 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Scn9aQ62205 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn9aQ62205 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.04□□□□□ -0.16
Scn9aQ62205 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.04□□□□□ -0.16
Scn9aQ62205 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.04□□□□□ -0.16
Scn9aQ62205 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Gm11500-201ENSMUST00000118237 601 ntBASIC14.04□□□□□ -0.16
Scn9aQ62205 Gm9673-201ENSMUST00000119287 781 ntBASIC14.04□□□□□ -0.16
Scn9aQ62205 Gm22846-201ENSMUST00000157706 270 ntBASIC14.04□□□□□ -0.16
Scn9aQ62205 Gm25554-201ENSMUST00000158075 113 ntBASIC14.04□□□□□ -0.16
Scn9aQ62205 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Gm8451-201ENSMUST00000170338 447 ntBASIC14.04□□□□□ -0.16
Scn9aQ62205 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC14.04□□□□□ -0.16
Scn9aQ62205 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Scn9aQ62205 Gm7536-201ENSMUST00000077389 444 ntBASIC14.04□□□□□ -0.16
Scn9aQ62205 Gm5453-201ENSMUST00000080866 447 ntBASIC14.04□□□□□ -0.16
Scn9aQ62205 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Scn9aQ62205 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn9aQ62205 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.04□□□□□ -0.16
Scn9aQ62205 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn9aQ62205 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm18801-201ENSMUST00000186616 536 ntBASIC14.03□□□□□ -0.16
Scn9aQ62205 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.03□□□□□ -0.16
Scn9aQ62205 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm10263-201ENSMUST00000085163 300 ntBASIC14.03□□□□□ -0.16
Scn9aQ62205 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.03□□□□□ -0.16
Scn9aQ62205 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms