Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm28450-201ENSMUST00000187349 638 ntBASIC14.38□□□□□ -0.11
Ctr9Q62018 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.38□□□□□ -0.11
Ctr9Q62018 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.38□□□□□ -0.11
Ctr9Q62018 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.38□□□□□ -0.11
Ctr9Q62018 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Ctr9Q62018 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ctr9Q62018 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.37□□□□□ -0.11
Ctr9Q62018 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm23949-201ENSMUST00000104027 127 ntBASIC14.37□□□□□ -0.11
Ctr9Q62018 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm27552-201ENSMUST00000183351 62 ntBASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm27844-201ENSMUST00000183613 62 ntBASIC14.37□□□□□ -0.11
Ctr9Q62018 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Mir6927-201ENSMUST00000184494 71 ntBASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm18711-201ENSMUST00000199341 750 ntBASIC14.37□□□□□ -0.11
Ctr9Q62018 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm5455-201ENSMUST00000058710 715 ntBASIC14.37□□□□□ -0.11
Ctr9Q62018 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.37□□□□□ -0.11
Ctr9Q62018 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctr9Q62018 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.37□□□□□ -0.11
Ctr9Q62018 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.36□□□□□ -0.11
Ctr9Q62018 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.36□□□□□ -0.11
Ctr9Q62018 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Gm25732-201ENSMUST00000175168 60 ntBASIC14.36□□□□□ -0.11
Ctr9Q62018 Gm27627-201ENSMUST00000183644 150 ntBASIC14.36□□□□□ -0.11
Ctr9Q62018 Gm38114-201ENSMUST00000191877 1232 ntBASIC14.36□□□□□ -0.11
Ctr9Q62018 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Gm43962-201ENSMUST00000203898 190 ntBASIC14.36□□□□□ -0.11
Ctr9Q62018 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.36□□□□□ -0.11
Ctr9Q62018 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms