Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gm23119-201ENSMUST00000158610 140 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gm27486-201ENSMUST00000184923 80 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gm27892-201ENSMUST00000185017 106 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gm18304-201ENSMUST00000189162 546 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gm45930-201ENSMUST00000221330 292 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.61□□□□□ -0.55
Nr1h4Q60641 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nr1h4Q60641 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm11597-201ENSMUST00000121423 964 ntBASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm24644-201ENSMUST00000157114 139 ntBASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm23984-201ENSMUST00000157139 203 ntBASIC11.6□□□□□ -0.55
Nr1h4Q60641 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm9002-201ENSMUST00000178437 499 ntBASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm8652-201ENSMUST00000181363 964 ntBASIC11.6□□□□□ -0.55
Nr1h4Q60641 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Gm9908-201ENSMUST00000211534 448 ntBASIC11.6□□□□□ -0.55
Nr1h4Q60641 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nr1h4Q60641 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms