Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Map1b-203ENSMUST00000223725 2669 ntBASIC14.19□□□□□ -0.14
Prdm1Q60636 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.19□□□□□ -0.14
Prdm1Q60636 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Prdm1Q60636 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.19□□□□□ -0.14
Prdm1Q60636 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prdm1Q60636 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Gm14208-201ENSMUST00000119645 678 ntBASIC14.19□□□□□ -0.14
Prdm1Q60636 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.19□□□□□ -0.14
Prdm1Q60636 Gm2383-201ENSMUST00000181461 807 ntBASIC14.19□□□□□ -0.14
Prdm1Q60636 Gm7003-201ENSMUST00000195089 312 ntBASIC14.19□□□□□ -0.14
Prdm1Q60636 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Gm44487-201ENSMUST00000205145 325 ntBASIC14.19□□□□□ -0.14
Prdm1Q60636 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.19□□□□□ -0.14
Prdm1Q60636 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prdm1Q60636 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.19□□□□□ -0.14
Prdm1Q60636 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.19□□□□□ -0.14
Prdm1Q60636 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.19□□□□□ -0.14
Prdm1Q60636 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Prdm1Q60636 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Prdm1Q60636 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prdm1Q60636 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Prdm1Q60636 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Prdm1Q60636 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.18□□□□□ -0.14
Prdm1Q60636 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.18□□□□□ -0.14
Prdm1Q60636 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm14130-201ENSMUST00000118417 987 ntBASIC14.18□□□□□ -0.14
Prdm1Q60636 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.18□□□□□ -0.14
Prdm1Q60636 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prdm1Q60636 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.18□□□□□ -0.14
Prdm1Q60636 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prdm1Q60636 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prdm1Q60636 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Prdm1Q60636 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prdm1Q60636 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prdm1Q60636 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prdm1Q60636 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prdm1Q60636 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prdm1Q60636 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Prdm1Q60636 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Prdm1Q60636 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prdm1Q60636 Gm13996-201ENSMUST00000118456 430 ntBASIC14.17□□□□□ -0.14
Prdm1Q60636 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prdm1Q60636 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prdm1Q60636 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prdm1Q60636 Gm27390-201ENSMUST00000184516 176 ntBASIC14.17□□□□□ -0.14
Prdm1Q60636 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms