Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Gm27530-201ENSMUST00000184096 98 ntBASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Gm18893-201ENSMUST00000198416 943 ntBASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Cog3-203ENSMUST00000227473 4197 ntBASIC14.57□□□□□ -0.08
Vps54Q5SPW0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gm7857-201ENSMUST00000117957 358 ntBASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gm5706-201ENSMUST00000181525 993 ntBASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gm27552-201ENSMUST00000183351 62 ntBASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gm27844-201ENSMUST00000183613 62 ntBASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gm17931-201ENSMUST00000208132 634 ntBASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gm17827-201ENSMUST00000211825 742 ntBASIC14.57□□□□□ -0.08
Vps54Q5SPW0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps54Q5SPW0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Mir6927-201ENSMUST00000184494 71 ntBASIC14.56□□□□□ -0.08
Vps54Q5SPW0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.56□□□□□ -0.08
Vps54Q5SPW0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms