Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Mir483-201ENSMUST00000093631 73 ntBASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc88aQ5SNZ0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm8956-201ENSMUST00000203939 825 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm2875-201ENSMUST00000211333 360 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm9797-202ENSMUST00000218003 294 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm3619-201ENSMUST00000219947 775 ntBASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Mir7677-201ENSMUST00000184226 67 ntBASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm4157-201ENSMUST00000211647 679 ntBASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc88aQ5SNZ0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms