Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm24830-201ENSMUST00000102024 166 ntBASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm12742-201ENSMUST00000117326 410 ntBASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm11793-201ENSMUST00000120433 981 ntBASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm26232-201ENSMUST00000083360 166 ntBASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
Trav5d-4Q5R1F6 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Gm24934-201ENSMUST00000103764 111 ntBASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Gm17420-201ENSMUST00000164753 153 ntBASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Gm28882-201ENSMUST00000185504 314 ntBASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Gm42627-201ENSMUST00000197347 224 ntBASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Gm43118-201ENSMUST00000199149 775 ntBASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Gm18054-201ENSMUST00000207539 555 ntBASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms