Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.04□□□□□ -0.32
Upf3bQ3ULL6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upf3bQ3ULL6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Upf3bQ3ULL6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.04□□□□□ -0.32
Upf3bQ3ULL6 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.04□□□□□ -0.32
Upf3bQ3ULL6 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.04□□□□□ -0.32
Upf3bQ3ULL6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Upf3bQ3ULL6 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.04□□□□□ -0.32
Upf3bQ3ULL6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upf3bQ3ULL6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upf3bQ3ULL6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Gm15276-201ENSMUST00000145953 498 ntBASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Gm18711-201ENSMUST00000199341 750 ntBASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upf3bQ3ULL6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Upf3bQ3ULL6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 AA914427-201ENSMUST00000193194 1166 ntBASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Gm38317-201ENSMUST00000195564 343 ntBASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Gm6082-201ENSMUST00000215204 454 ntBASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Upf3bQ3ULL6 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Upf3bQ3ULL6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.01□□□□□ -0.33
Upf3bQ3ULL6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3bQ3ULL6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3bQ3ULL6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.01□□□□□ -0.33
Upf3bQ3ULL6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3bQ3ULL6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3bQ3ULL6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3bQ3ULL6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3bQ3ULL6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3bQ3ULL6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Upf3bQ3ULL6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms