Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Gm29396-201ENSMUST00000185659 716 ntBASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Gm43118-201ENSMUST00000199149 775 ntBASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Morn2-202ENSMUST00000227729 656 ntBASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Gm9823-201ENSMUST00000051212 327 ntBASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Brf2Q3UAW9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Brf2Q3UAW9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Brf2Q3UAW9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.46□□□□□ -0.58
Brf2Q3UAW9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Brf2Q3UAW9 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Brf2Q3UAW9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Brf2Q3UAW9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Brf2Q3UAW9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Brf2Q3UAW9 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Brf2Q3UAW9 Pck2-205ENSMUST00000226352 2784 ntBASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Gm13786-201ENSMUST00000122371 333 ntBASIC11.45□□□□□ -0.58
Brf2Q3UAW9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Gm18054-201ENSMUST00000207539 555 ntBASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Gm10608-202ENSMUST00000213924 676 ntBASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Brf2Q3UAW9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms