Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf180Q3U827 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Gm7805-201ENSMUST00000154348 448 ntBASIC14.12□□□□□ -0.15
Rnf180Q3U827 Gm26443-201ENSMUST00000179610 110 ntBASIC14.12□□□□□ -0.15
Rnf180Q3U827 Gm38233-201ENSMUST00000194259 807 ntBASIC14.12□□□□□ -0.15
Rnf180Q3U827 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC14.12□□□□□ -0.15
Rnf180Q3U827 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC14.12□□□□□ -0.15
Rnf180Q3U827 AC118639.1-202ENSMUST00000226957 653 ntBASIC14.12□□□□□ -0.15
Rnf180Q3U827 Gm26782-203ENSMUST00000227103 751 ntBASIC14.12□□□□□ -0.15
Rnf180Q3U827 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.12□□□□□ -0.15
Rnf180Q3U827 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Rnf180Q3U827 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.11□□□□□ -0.15
Rnf180Q3U827 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Rnf180Q3U827 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf180Q3U827 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Gm12389-201ENSMUST00000117696 418 ntBASIC14.11□□□□□ -0.15
Rnf180Q3U827 AA623943-201ENSMUST00000121794 354 ntBASIC14.11□□□□□ -0.15
Rnf180Q3U827 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC14.11□□□□□ -0.15
Rnf180Q3U827 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Gm7504-201ENSMUST00000201449 424 ntBASIC14.11□□□□□ -0.15
Rnf180Q3U827 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf180Q3U827 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Rnf180Q3U827 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Mir598-201ENSMUST00000102094 79 ntBASIC14.1□□□□□ -0.15
Rnf180Q3U827 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Mir7035-201ENSMUST00000184713 82 ntBASIC14.1□□□□□ -0.15
Rnf180Q3U827 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 AC022682.1-201ENSMUST00000224624 2023 ntBASIC14.1□□□□□ -0.15
Rnf180Q3U827 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf180Q3U827 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms