Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 AC163646.3-202ENSMUST00000228685 691 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm26132-201ENSMUST00000083166 148 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Gm23916-201ENSMUST00000158484 399 ntBASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Gm10120-201ENSMUST00000219845 357 ntBASIC6.21□□□□□ -1.41
Ush2AQ2QI47 AC156561.1-201ENSMUST00000224774 233 ntBASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Gm44106-201ENSMUST00000203153 1599 ntBASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Gm43134-201ENSMUST00000199434 1886 ntBASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ush2AQ2QI47 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm45779-201ENSMUST00000212189 4064 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm9415-201ENSMUST00000200462 1321 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm19927-201ENSMUST00000185792 781 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm19058-201ENSMUST00000192135 598 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm44236-201ENSMUST00000204492 513 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm45745-201ENSMUST00000211447 1180 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm5526-201ENSMUST00000153604 423 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm8707-201ENSMUST00000183325 980 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Mir7051-201ENSMUST00000184167 73 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gnpnat1-202ENSMUST00000226276 710 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm8730-201ENSMUST00000076373 954 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Gm43868-201ENSMUST00000205187 2114 ntBASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Ush2AQ2QI47 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm29101-201ENSMUST00000188329 1471 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm14571-201ENSMUST00000118292 570 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms