Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col9a2Q07643 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col9a2Q07643 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm8566-201ENSMUST00000120174 465 ntBASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm4310-201ENSMUST00000177847 889 ntBASIC13.16□□□□□ -0.3
Col9a2Q07643 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm8343-201ENSMUST00000182705 994 ntBASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm9136-201ENSMUST00000193368 454 ntBASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm4482-201ENSMUST00000200876 742 ntBASIC13.16□□□□□ -0.3
Col9a2Q07643 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.16□□□□□ -0.3
Col9a2Q07643 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col9a2Q07643 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.16□□□□□ -0.3
Col9a2Q07643 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.16□□□□□ -0.3
Col9a2Q07643 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col9a2Q07643 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col9a2Q07643 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm11511-201ENSMUST00000118146 540 ntBASIC13.15□□□□□ -0.3
Col9a2Q07643 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm3508-201ENSMUST00000186012 792 ntBASIC13.15□□□□□ -0.3
Col9a2Q07643 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm43184-201ENSMUST00000197247 542 ntBASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.15□□□□□ -0.3
Col9a2Q07643 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.15□□□□□ -0.3
Col9a2Q07643 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Ginm1-202ENSMUST00000065124 300 ntBASIC13.15□□□□□ -0.3
Col9a2Q07643 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Col9a2Q07643 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a2Q07643 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col9a2Q07643 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col9a2Q07643 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
Col9a2Q07643 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms