Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Gm23912-201ENSMUST00000104687 87 ntBASIC12.25□□□□□ -0.45
Pfdn6Q03958 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.25□□□□□ -0.45
Pfdn6Q03958 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.25□□□□□ -0.45
Pfdn6Q03958 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Gm37424-201ENSMUST00000191727 561 ntBASIC12.25□□□□□ -0.45
Pfdn6Q03958 AY702102-202ENSMUST00000194651 1173 ntBASIC12.25□□□□□ -0.45
Pfdn6Q03958 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Gm25857-201ENSMUST00000082788 129 ntBASIC12.25□□□□□ -0.45
Pfdn6Q03958 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.25□□□□□ -0.45
Pfdn6Q03958 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn6Q03958 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.24□□□□□ -0.45
Pfdn6Q03958 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Gm38002-201ENSMUST00000193255 180 ntBASIC12.24□□□□□ -0.45
Pfdn6Q03958 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.24□□□□□ -0.45
Pfdn6Q03958 Gm45880-201ENSMUST00000213041 853 ntBASIC12.24□□□□□ -0.45
Pfdn6Q03958 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.24□□□□□ -0.45
Pfdn6Q03958 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.24□□□□□ -0.45
Pfdn6Q03958 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.24□□□□□ -0.45
Pfdn6Q03958 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Rgr-203ENSMUST00000225070 4704 ntBASIC12.24□□□□□ -0.45
Pfdn6Q03958 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pfdn6Q03958 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn6Q03958 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.23□□□□□ -0.45
Pfdn6Q03958 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms