Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cacna1sQ02789 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cacna1sQ02789 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1sQ02789 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1sQ02789 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.02■□□□□ -0
Cacna1sQ02789 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 Gm37600-201ENSMUST00000193764 3292 ntBASIC15.02■□□□□ -0
Cacna1sQ02789 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.02■□□□□ -0
Cacna1sQ02789 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cacna1sQ02789 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cacna1sQ02789 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC15.02■□□□□ -0
Cacna1sQ02789 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC15.02■□□□□ -0
Cacna1sQ02789 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 AC152169.1-201ENSMUST00000223901 701 ntBASIC15.02■□□□□ -0
Cacna1sQ02789 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.02■□□□□ -0
Cacna1sQ02789 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1sQ02789 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1sQ02789 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1sQ02789 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Cacna1sQ02789 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1sQ02789 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1sQ02789 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1sQ02789 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1sQ02789 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1sQ02789 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1sQ02789 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1sQ02789 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.02□□□□□ -0.01
Cacna1sQ02789 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC15.01□□□□□ -0.01
Cacna1sQ02789 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 AC154589.2-201ENSMUST00000228847 251 ntBASIC15.01□□□□□ -0.01
Cacna1sQ02789 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Gm42970-201ENSMUST00000196407 1352 ntBASIC15.01□□□□□ -0.01
Cacna1sQ02789 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC15.01□□□□□ -0.01
Cacna1sQ02789 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1sQ02789 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15□□□□□ -0.01
Cacna1sQ02789 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cacna1sQ02789 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Gm4982-201ENSMUST00000160440 1098 ntBASIC15□□□□□ -0.01
Cacna1sQ02789 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cacna1sQ02789 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cacna1sQ02789 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15□□□□□ -0.01
Cacna1sQ02789 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC15□□□□□ -0.01
Cacna1sQ02789 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC15□□□□□ -0.01
Cacna1sQ02789 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Gm42432-201ENSMUST00000197902 1617 ntBASIC15□□□□□ -0.01
Cacna1sQ02789 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms