Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.55□□□□□ -0.56
Nkx3-2P97503 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.55□□□□□ -0.56
Nkx3-2P97503 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.55□□□□□ -0.56
Nkx3-2P97503 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Gm24231-201ENSMUST00000104315 133 ntBASIC11.55□□□□□ -0.56
Nkx3-2P97503 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.55□□□□□ -0.56
Nkx3-2P97503 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.55□□□□□ -0.56
Nkx3-2P97503 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.55□□□□□ -0.56
Nkx3-2P97503 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.54□□□□□ -0.56
Nkx3-2P97503 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.54□□□□□ -0.56
Nkx3-2P97503 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Gm14028-201ENSMUST00000117434 479 ntBASIC11.54□□□□□ -0.56
Nkx3-2P97503 Gm7857-201ENSMUST00000117957 358 ntBASIC11.54□□□□□ -0.56
Nkx3-2P97503 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Gm5070-201ENSMUST00000177599 862 ntBASIC11.54□□□□□ -0.56
Nkx3-2P97503 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.54□□□□□ -0.56
Nkx3-2P97503 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms