Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.23□□□□□ -0.29
Trim43cP86449 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim43cP86449 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
Trim43cP86449 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trim43cP86449 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim43cP86449 Gm38317-201ENSMUST00000195564 343 ntBASIC13.23□□□□□ -0.29
Trim43cP86449 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim43cP86449 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim43cP86449 Gm19187-201ENSMUST00000206781 892 ntBASIC13.23□□□□□ -0.29
Trim43cP86449 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trim43cP86449 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.23□□□□□ -0.29
Trim43cP86449 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim43cP86449 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim43cP86449 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim43cP86449 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trim43cP86449 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trim43cP86449 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim43cP86449 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Gm5419-201ENSMUST00000119301 527 ntBASIC13.22□□□□□ -0.29
Trim43cP86449 Gm12036-201ENSMUST00000120008 530 ntBASIC13.22□□□□□ -0.29
Trim43cP86449 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trim43cP86449 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim43cP86449 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim43cP86449 Gm9230-201ENSMUST00000188228 532 ntBASIC13.22□□□□□ -0.29
Trim43cP86449 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.22□□□□□ -0.29
Trim43cP86449 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim43cP86449 Gzmn-202ENSMUST00000225535 989 ntBASIC13.22□□□□□ -0.29
Trim43cP86449 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.22□□□□□ -0.29
Trim43cP86449 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trim43cP86449 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.22□□□□□ -0.29
Trim43cP86449 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.22□□□□□ -0.29
Trim43cP86449 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43cP86449 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim43cP86449 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.21□□□□□ -0.29
Trim43cP86449 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim43cP86449 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trim43cP86449 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.21□□□□□ -0.29
Trim43cP86449 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.21□□□□□ -0.29
Trim43cP86449 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim43cP86449 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim43cP86449 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.21□□□□□ -0.29
Trim43cP86449 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.21□□□□□ -0.29
Trim43cP86449 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim43cP86449 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43cP86449 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43cP86449 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms