Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Gm38245-201ENSMUST00000191702 2621 ntBASIC12.44□□□□□ -0.42
Vgll3P85442 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vgll3P85442 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vgll3P85442 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vgll3P85442 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Vgll3P85442 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vgll3P85442 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Vgll3P85442 Nkd1-202ENSMUST00000169179 4081 ntTSL 2 BASIC12.44□□□□□ -0.42
Vgll3P85442 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vgll3P85442 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vgll3P85442 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vgll3P85442 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vgll3P85442 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vgll3P85442 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vgll3P85442 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Heatr4-201ENSMUST00000164935 3038 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vgll3P85442 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC12.43□□□□□ -0.42
Vgll3P85442 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vgll3P85442 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.43□□□□□ -0.42
Vgll3P85442 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Lrrc71-201ENSMUST00000023846 3988 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vgll3P85442 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Vgll3P85442 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Vgll3P85442 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.43□□□□□ -0.42
Vgll3P85442 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vgll3P85442 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vgll3P85442 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Ophn1-202ENSMUST00000113826 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.43□□□□□ -0.42
Vgll3P85442 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vgll3P85442 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.43□□□□□ -0.42
Vgll3P85442 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.42□□□□□ -0.42
Vgll3P85442 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.42□□□□□ -0.42
Vgll3P85442 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vgll3P85442 Ccdc136-209ENSMUST00000181464 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vgll3P85442 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Vgll3P85442 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Vgll3P85442 Gm15920-201ENSMUST00000118998 402 ntBASIC12.42□□□□□ -0.42
Vgll3P85442 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Vgll3P85442 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.42□□□□□ -0.42
Vgll3P85442 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.42□□□□□ -0.42
Vgll3P85442 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.42□□□□□ -0.42
Vgll3P85442 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.42□□□□□ -0.42
Vgll3P85442 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.42□□□□□ -0.42
Vgll3P85442 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.42□□□□□ -0.42
Vgll3P85442 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.42□□□□□ -0.42
Vgll3P85442 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Zfp677-201ENSMUST00000056107 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.42□□□□□ -0.42
Vgll3P85442 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vgll3P85442 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 Pcdhb6-201ENSMUST00000061717 3729 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vgll3P85442 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Vgll3P85442 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vgll3P85442 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vgll3P85442 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms