Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.52□□□□□ -0.73
Otx1P80205 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Otx1P80205 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.52□□□□□ -0.73
Otx1P80205 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Gm30285-201ENSMUST00000214614 422 ntBASIC10.52□□□□□ -0.73
Otx1P80205 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.52□□□□□ -0.73
Otx1P80205 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.52□□□□□ -0.73
Otx1P80205 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.52□□□□□ -0.73
Otx1P80205 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Otx1P80205 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Otx1P80205 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Otx1P80205 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.52□□□□□ -0.73
Otx1P80205 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.51□□□□□ -0.73
Otx1P80205 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.51□□□□□ -0.73
Otx1P80205 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.51□□□□□ -0.73
Otx1P80205 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.51□□□□□ -0.73
Otx1P80205 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Otx1P80205 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Otx1P80205 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Gm22323-201ENSMUST00000103832 109 ntBASIC10.51□□□□□ -0.73
Otx1P80205 Gm14247-201ENSMUST00000120950 237 ntBASIC10.51□□□□□ -0.73
Otx1P80205 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Otx1P80205 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.51□□□□□ -0.73
Otx1P80205 Gm37466-201ENSMUST00000195692 652 ntBASIC10.51□□□□□ -0.73
Otx1P80205 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.51□□□□□ -0.73
Otx1P80205 Gm8712-201ENSMUST00000221090 701 ntBASIC10.51□□□□□ -0.73
Otx1P80205 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.51□□□□□ -0.73
Otx1P80205 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.51□□□□□ -0.73
Otx1P80205 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Otx1P80205 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Otx1P80205 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Otx1P80205 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.51□□□□□ -0.73
Otx1P80205 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Otx1P80205 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Otx1P80205 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.51□□□□□ -0.73
Otx1P80205 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Otx1P80205 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Otx1P80205 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.5□□□□□ -0.73
Otx1P80205 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.5□□□□□ -0.73
Otx1P80205 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Otx1P80205 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Otx1P80205 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.5□□□□□ -0.73
Otx1P80205 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms