Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.41□□□□□ -0.58
Six5P70178 Gm43179-201ENSMUST00000198797 275 ntBASIC11.41□□□□□ -0.58
Six5P70178 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Six5P70178 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Six5P70178 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Six5P70178 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Six5P70178 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Six5P70178 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Six5P70178 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.41□□□□□ -0.58
Six5P70178 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Six5P70178 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Six5P70178 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.4□□□□□ -0.58
Six5P70178 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Six5P70178 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.4□□□□□ -0.58
Six5P70178 Gm14723-201ENSMUST00000118686 215 ntBASIC11.4□□□□□ -0.58
Six5P70178 Gm14381-201ENSMUST00000122105 414 ntBASIC11.4□□□□□ -0.58
Six5P70178 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.4□□□□□ -0.58
Six5P70178 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.4□□□□□ -0.58
Six5P70178 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Gm27046-201ENSMUST00000182160 463 ntBASIC11.4□□□□□ -0.58
Six5P70178 Gm43758-201ENSMUST00000199500 367 ntBASIC11.4□□□□□ -0.58
Six5P70178 Gm43822-201ENSMUST00000200285 476 ntBASIC11.4□□□□□ -0.58
Six5P70178 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.4□□□□□ -0.58
Six5P70178 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Gm19187-201ENSMUST00000206781 892 ntBASIC11.4□□□□□ -0.58
Six5P70178 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.4□□□□□ -0.58
Six5P70178 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.4□□□□□ -0.58
Six5P70178 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.4□□□□□ -0.58
Six5P70178 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.4□□□□□ -0.58
Six5P70178 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Six5P70178 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Six5P70178 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.4□□□□□ -0.58
Six5P70178 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Six5P70178 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.4□□□□□ -0.58
Six5P70178 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.4□□□□□ -0.58
Six5P70178 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Six5P70178 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.4□□□□□ -0.58
Six5P70178 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Six5P70178 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Six5P70178 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Six5P70178 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Six5P70178 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.39□□□□□ -0.59
Six5P70178 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Six5P70178 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Six5P70178 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.39□□□□□ -0.59
Six5P70178 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Six5P70178 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Gm24255-201ENSMUST00000104481 128 ntBASIC11.39□□□□□ -0.59
Six5P70178 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Six5P70178 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.39□□□□□ -0.59
Six5P70178 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Six5P70178 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Six5P70178 Gm20482-202ENSMUST00000174729 825 ntBASIC11.39□□□□□ -0.59
Six5P70178 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.39□□□□□ -0.59
Six5P70178 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.39□□□□□ -0.59
Six5P70178 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Six5P70178 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms