Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Crnkl1P63154 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Crnkl1P63154 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Crnkl1P63154 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.05□□□□□ -0.48
Crnkl1P63154 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.05□□□□□ -0.48
Crnkl1P63154 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.05□□□□□ -0.48
Crnkl1P63154 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Crnkl1P63154 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.04□□□□□ -0.48
Crnkl1P63154 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.04□□□□□ -0.48
Crnkl1P63154 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.04□□□□□ -0.48
Crnkl1P63154 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.04□□□□□ -0.48
Crnkl1P63154 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.04□□□□□ -0.48
Crnkl1P63154 Gm6152-201ENSMUST00000151704 340 ntBASIC12.04□□□□□ -0.48
Crnkl1P63154 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.04□□□□□ -0.48
Crnkl1P63154 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.04□□□□□ -0.48
Crnkl1P63154 Gm5035-201ENSMUST00000215581 927 ntBASIC12.04□□□□□ -0.48
Crnkl1P63154 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.04□□□□□ -0.48
Crnkl1P63154 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.04□□□□□ -0.48
Crnkl1P63154 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Crnkl1P63154 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.04□□□□□ -0.48
Crnkl1P63154 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.04□□□□□ -0.48
Crnkl1P63154 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Crnkl1P63154 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Gm4984-201ENSMUST00000115987 360 ntBASIC12.03□□□□□ -0.48
Crnkl1P63154 Gm12291-201ENSMUST00000121627 311 ntBASIC12.03□□□□□ -0.48
Crnkl1P63154 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Gm27839-201ENSMUST00000184242 106 ntBASIC12.03□□□□□ -0.48
Crnkl1P63154 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.03□□□□□ -0.48
Crnkl1P63154 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.03□□□□□ -0.48
Crnkl1P63154 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.03□□□□□ -0.48
Crnkl1P63154 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.03□□□□□ -0.48
Crnkl1P63154 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Crnkl1P63154 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms