Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ybx1P62960 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.48□□□□□ -0.41
Ybx1P62960 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.48□□□□□ -0.41
Ybx1P62960 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Ybx1P62960 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ybx1P62960 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ybx1P62960 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ybx1P62960 Gm24891-201ENSMUST00000104391 136 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.47□□□□□ -0.41
Ybx1P62960 Gm14460-201ENSMUST00000121511 639 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.47□□□□□ -0.41
Ybx1P62960 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Gm23085-201ENSMUST00000157849 293 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Gm28686-201ENSMUST00000187404 609 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Gm9540-201ENSMUST00000188230 478 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Gm4157-201ENSMUST00000211647 679 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ybx1P62960 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Gm26035-201ENSMUST00000083065 308 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.47□□□□□ -0.41
Ybx1P62960 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ybx1P62960 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.46□□□□□ -0.41
Ybx1P62960 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Gm26286-201ENSMUST00000104166 134 ntBASIC12.46□□□□□ -0.41
Ybx1P62960 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.46□□□□□ -0.41
Ybx1P62960 Gm12164-201ENSMUST00000121695 551 ntBASIC12.46□□□□□ -0.41
Ybx1P62960 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.46□□□□□ -0.41
Ybx1P62960 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.46□□□□□ -0.41
Ybx1P62960 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ybx1P62960 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ybx1P62960 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Ybx1P62960 Gm8343-201ENSMUST00000182705 994 ntBASIC12.46□□□□□ -0.41
Ybx1P62960 Gm10774-201ENSMUST00000188689 204 ntBASIC12.46□□□□□ -0.41
Ybx1P62960 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Gm6905-201ENSMUST00000205729 511 ntBASIC12.46□□□□□ -0.41
Ybx1P62960 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.46□□□□□ -0.41
Ybx1P62960 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ybx1P62960 Gm10288-201ENSMUST00000084614 537 ntBASIC12.46□□□□□ -0.41
Ybx1P62960 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ybx1P62960 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ybx1P62960 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ybx1P62960 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ybx1P62960 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ybx1P62960 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ybx1P62960 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ybx1P62960 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ybx1P62960 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms