Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.04□□□□□ -0.64
Lsm3P62311 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.04□□□□□ -0.64
Lsm3P62311 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lsm3P62311 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lsm3P62311 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.04□□□□□ -0.64
Lsm3P62311 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Gm4995-201ENSMUST00000117247 432 ntBASIC11.04□□□□□ -0.64
Lsm3P62311 Gm14704-201ENSMUST00000120300 874 ntBASIC11.04□□□□□ -0.64
Lsm3P62311 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.04□□□□□ -0.64
Lsm3P62311 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.04□□□□□ -0.64
Lsm3P62311 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Lsm3P62311 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.04□□□□□ -0.64
Lsm3P62311 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.04□□□□□ -0.64
Lsm3P62311 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Lsm3P62311 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.04□□□□□ -0.64
Lsm3P62311 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Lsm3P62311 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Lsm3P62311 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.04□□□□□ -0.64
Lsm3P62311 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.04□□□□□ -0.64
Lsm3P62311 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.03□□□□□ -0.64
Lsm3P62311 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.03□□□□□ -0.64
Lsm3P62311 Gm14921-201ENSMUST00000118643 908 ntBASIC11.03□□□□□ -0.64
Lsm3P62311 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.03□□□□□ -0.64
Lsm3P62311 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.03□□□□□ -0.64
Lsm3P62311 Gm9522-201ENSMUST00000182394 926 ntBASIC11.03□□□□□ -0.64
Lsm3P62311 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Lsm3P62311 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.03□□□□□ -0.64
Lsm3P62311 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Lsm3P62311 Gm28693-202ENSMUST00000190758 331 ntBASIC11.03□□□□□ -0.64
Lsm3P62311 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.03□□□□□ -0.64
Lsm3P62311 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.03□□□□□ -0.64
Lsm3P62311 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Lsm3P62311 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.03□□□□□ -0.64
Lsm3P62311 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Lsm3P62311 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.03□□□□□ -0.64
Lsm3P62311 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.03□□□□□ -0.64
Lsm3P62311 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.03□□□□□ -0.64
Lsm3P62311 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Lsm3P62311 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm3P62311 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.03□□□□□ -0.64
Lsm3P62311 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm3P62311 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm3P62311 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm3P62311 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.02□□□□□ -0.64
Lsm3P62311 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Lsm3P62311 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Lsm3P62311 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm3P62311 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm3P62311 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Lsm3P62311 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.02□□□□□ -0.65
Lsm3P62311 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Gm13689-201ENSMUST00000119360 685 ntBASIC11.02□□□□□ -0.65
Lsm3P62311 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Gm27618-201ENSMUST00000183671 60 ntBASIC11.02□□□□□ -0.65
Lsm3P62311 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms