Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.82□□□□□ -0.84
Lmo4P61969 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.81□□□□□ -0.84
Lmo4P61969 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.81□□□□□ -0.84
Lmo4P61969 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Lmo4P61969 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm44999-201ENSMUST00000207456 1493 ntBASIC9.81□□□□□ -0.84
Lmo4P61969 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Lmo4P61969 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm15595-201ENSMUST00000120840 961 ntBASIC9.81□□□□□ -0.84
Lmo4P61969 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.81□□□□□ -0.84
Lmo4P61969 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm15881-201ENSMUST00000148792 942 ntBASIC9.81□□□□□ -0.84
Lmo4P61969 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Lmo4P61969 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.81□□□□□ -0.84
Lmo4P61969 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.81□□□□□ -0.84
Lmo4P61969 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.81□□□□□ -0.84
Lmo4P61969 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.81□□□□□ -0.84
Lmo4P61969 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Lmo4P61969 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.81□□□□□ -0.84
Lmo4P61969 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Lmo4P61969 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Lmo4P61969 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Lmo4P61969 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Lmo4P61969 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.81□□□□□ -0.84
Lmo4P61969 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lmo4P61969 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Lmo4P61969 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Lmo4P61969 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Lmo4P61969 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Lmo4P61969 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC9.8□□□□□ -0.84
Lmo4P61969 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lmo4P61969 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Gm8815-201ENSMUST00000173809 620 ntBASIC9.8□□□□□ -0.84
Lmo4P61969 Gm4310-201ENSMUST00000177847 889 ntBASIC9.8□□□□□ -0.84
Lmo4P61969 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Lmo4P61969 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.8□□□□□ -0.84
Lmo4P61969 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC9.8□□□□□ -0.84
Lmo4P61969 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Lmo4P61969 Gm2553-201ENSMUST00000215986 605 ntBASIC9.8□□□□□ -0.84
Lmo4P61969 Gm4797-201ENSMUST00000219075 1283 ntBASIC9.8□□□□□ -0.84
Lmo4P61969 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.8□□□□□ -0.84
Lmo4P61969 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms