Protein–RNA interactions for Protein: P61406

Smg6, Telomerase-binding protein EST1A, mousemouse

Known RBP Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg6P61406 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Smg6P61406 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smg6P61406 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg6P61406 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smg6P61406 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smg6P61406 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC16.73■□□□□ 0.27
Smg6P61406 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC16.73■□□□□ 0.27
Smg6P61406 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg6P61406 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg6P61406 Gm37513-201ENSMUST00000194830 2268 ntBASIC16.73■□□□□ 0.27
Smg6P61406 Gm38378-201ENSMUST00000195153 2268 ntBASIC16.73■□□□□ 0.27
Smg6P61406 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.73■□□□□ 0.27
Smg6P61406 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg6P61406 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg6P61406 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg6P61406 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg6P61406 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smg6P61406 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC16.72■□□□□ 0.27
Smg6P61406 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.72■□□□□ 0.27
Smg6P61406 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smg6P61406 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smg6P61406 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.72■□□□□ 0.27
Smg6P61406 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.72■□□□□ 0.27
Smg6P61406 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smg6P61406 Gm42913-201ENSMUST00000197936 1853 ntBASIC16.72■□□□□ 0.27
Smg6P61406 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Smg6P61406 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.72■□□□□ 0.27
Smg6P61406 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smg6P61406 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Smg6P61406 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smg6P61406 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.71■□□□□ 0.27
Smg6P61406 Gm14644-201ENSMUST00000116671 647 ntBASIC16.71■□□□□ 0.27
Smg6P61406 Gm11331-201ENSMUST00000119764 288 ntBASIC16.71■□□□□ 0.27
Smg6P61406 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Gm37666-201ENSMUST00000194110 866 ntBASIC16.71■□□□□ 0.27
Smg6P61406 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.71■□□□□ 0.27
Smg6P61406 Gm44262-201ENSMUST00000204969 372 ntBASIC16.71■□□□□ 0.27
Smg6P61406 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC16.71■□□□□ 0.27
Smg6P61406 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.71■□□□□ 0.27
Smg6P61406 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.71■□□□□ 0.27
Smg6P61406 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smg6P61406 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smg6P61406 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smg6P61406 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Smg6P61406 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smg6P61406 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
Smg6P61406 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.7■□□□□ 0.26
Smg6P61406 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Smg6P61406 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Smg6P61406 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.7■□□□□ 0.26
Smg6P61406 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Smg6P61406 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.7■□□□□ 0.26
Smg6P61406 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smg6P61406 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.7■□□□□ 0.26
Smg6P61406 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC16.7■□□□□ 0.26
Smg6P61406 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg6P61406 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms