Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.56□□□□□ -0.24
Tpm1P58771 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tpm1P58771 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
Tpm1P58771 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.56□□□□□ -0.24
Tpm1P58771 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Tpm1P58771 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.56□□□□□ -0.24
Tpm1P58771 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.56□□□□□ -0.24
Tpm1P58771 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Tpm1P58771 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.55□□□□□ -0.24
Tpm1P58771 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Tpm1P58771 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.55□□□□□ -0.24
Tpm1P58771 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.55□□□□□ -0.24
Tpm1P58771 Snord83b-201ENSMUST00000104546 94 ntBASIC13.55□□□□□ -0.24
Tpm1P58771 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.55□□□□□ -0.24
Tpm1P58771 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.55□□□□□ -0.24
Tpm1P58771 Gm4034-201ENSMUST00000187674 480 ntBASIC13.55□□□□□ -0.24
Tpm1P58771 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.55□□□□□ -0.24
Tpm1P58771 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.55□□□□□ -0.24
Tpm1P58771 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Tpm1P58771 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Tpm1P58771 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tpm1P58771 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.55□□□□□ -0.24
Tpm1P58771 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Tpm1P58771 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Tpm1P58771 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.54□□□□□ -0.24
Tpm1P58771 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Tpm1P58771 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tpm1P58771 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Tpm1P58771 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Tpm1P58771 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Tpm1P58771 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tpm1P58771 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Tpm1P58771 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Gm8810-201ENSMUST00000172895 754 ntBASIC13.54□□□□□ -0.24
Tpm1P58771 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.54□□□□□ -0.24
Tpm1P58771 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.54□□□□□ -0.24
Tpm1P58771 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Mir6977-201ENSMUST00000184960 64 ntBASIC13.54□□□□□ -0.24
Tpm1P58771 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Gm19163-201ENSMUST00000223313 780 ntBASIC13.54□□□□□ -0.24
Tpm1P58771 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.54□□□□□ -0.24
Tpm1P58771 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tpm1P58771 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.54□□□□□ -0.24
Tpm1P58771 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Tpm1P58771 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tpm1P58771 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Tpm1P58771 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Tpm1P58771 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.54□□□□□ -0.24
Tpm1P58771 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tpm1P58771 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.53□□□□□ -0.24
Tpm1P58771 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms