Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ctdsp1P58466 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ctdsp1P58466 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ctdsp1P58466 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.46□□□□□ -0.89
Ctdsp1P58466 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.46□□□□□ -0.89
Ctdsp1P58466 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.46□□□□□ -0.89
Ctdsp1P58466 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
Ctdsp1P58466 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ctdsp1P58466 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ctdsp1P58466 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ctdsp1P58466 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ctdsp1P58466 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Gm12036-201ENSMUST00000120008 530 ntBASIC9.46□□□□□ -0.9
Ctdsp1P58466 Gm15703-201ENSMUST00000120250 880 ntBASIC9.46□□□□□ -0.9
Ctdsp1P58466 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.46□□□□□ -0.9
Ctdsp1P58466 Gm11434-201ENSMUST00000122379 629 ntBASIC9.46□□□□□ -0.9
Ctdsp1P58466 Mir1897-201ENSMUST00000122581 272 ntBASIC9.46□□□□□ -0.9
Ctdsp1P58466 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC9.46□□□□□ -0.9
Ctdsp1P58466 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.46□□□□□ -0.9
Ctdsp1P58466 AC158538.1-201ENSMUST00000225870 294 ntBASIC9.46□□□□□ -0.9
Ctdsp1P58466 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ctdsp1P58466 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.45□□□□□ -0.9
Ctdsp1P58466 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.45□□□□□ -0.9
Ctdsp1P58466 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 CT009713.10-201ENSMUST00000225013 1986 ntBASIC9.45□□□□□ -0.9
Ctdsp1P58466 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Gm24231-201ENSMUST00000104315 133 ntBASIC9.45□□□□□ -0.9
Ctdsp1P58466 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Gm24589-201ENSMUST00000116692 94 ntBASIC9.45□□□□□ -0.9
Ctdsp1P58466 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Gm28033-201ENSMUST00000184224 96 ntBASIC9.45□□□□□ -0.9
Ctdsp1P58466 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.45□□□□□ -0.9
Ctdsp1P58466 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Gm5628-201ENSMUST00000222318 1049 ntBASIC9.45□□□□□ -0.9
Ctdsp1P58466 Gm807-202ENSMUST00000224929 408 ntBASIC9.45□□□□□ -0.9
Ctdsp1P58466 AC131710.1-201ENSMUST00000228336 990 ntBASIC9.45□□□□□ -0.9
Ctdsp1P58466 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms